Tools for breeding value estimation

BLUP PAJA

A computationally efficient algorithm to leverage average information REML for (co)variance component estimation in the genomic era

Refereed scientific publications
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2024

A computationally feasible multi-trait single-step genomic prediction model with trait-specific marker weights

Refereed scientific publications
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2024

Pre-selection approaches or some models with Mendelian sampling terms

Other publications
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2023

Segregation between breeds and local breed proportions in genetic and genomic models for crossbreds

Refereed scientific publications
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2023

Efficient large-scale single-step evaluations and indirect genomic prediction of genotyped selection candidates

Refereed scientific publications
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2023

Invited review: Reliability computation from the animal model era to the single-step genomic model era

Refereed scientific publications
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2023

A computationally efficient method for approximating reliabilities in large-scale single-step genomic prediction

Refereed scientific publications
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2023

Local breed proportions and local breed heterozygosity in genomic predictions for crossbred dairy cows

Refereed scientific publications
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2022

Animal board invited review: Genomic-based improvement of cattle in response to climate change

Refereed scientific publications
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2022

Indirect genomic prediction reduces computational costs in large-scale single-step evaluations

Other publications
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2022

Evaluating the suitability of subjectively defined base populations

Other publications
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2022

Breeding value reliabilities for multiple-trait single-step genomic best linear unbiased predictor

Refereed scientific publications
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2022

Single-step genomic BLUP with genetic groups and automatic adjustment for allele coding

Refereed scientific publications
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2022

Estimation of individual animal SNP-BLUP reliability using full Monte Carlo sampling

Refereed scientific publications
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2021

Estimation of social genetic effects on feeding behaviour and production traits in pigs

Refereed scientific publications
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2021

Metafounder approach for single-step genomic evaluations of Red Dairy cattle

Refereed scientific publications
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2020

Bpop: an efficient program for estimating base population allele frequencies in single and multiple group structured populations

Refereed scientific publications
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2020

Snp_blup_rel: software for calculating individual animal SNP-BLUP model reliabilities

Refereed scientific publications
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2020

Genetic diversity and population structure of Boer and Nubian goats in Mexico

Refereed scientific publications
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2020

Using Monte Carlo method to include polygenic effects in calculation of SNP-BLUP model reliability

Refereed scientific publications
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2020

Genealogical data of Boer and Nubian goats in Mexico

Refereed scientific publications
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2020

MiX99 : Technical reference guide for MiX99 pre-processor. Release XI/2019

Other publications
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2019

MiX99 : Command Language Interface Manual (CLIM). Release XI/2019

Other publications
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2019

MiX99 : Technical reference guide for MiX99 solver. Release XI/2019

Other publications
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2019